BIO server   BIO server
  Kabai Péter   Peter Kabai
 
       
 

back to Wildlife Ecology and Management

elective course

   
       
 
   
 
3. Study design and population biology methods
 
 

Why study populations?

To understand how it works. „basic research”
To predict future „applied research”
To manage. „application”


Factors to be considered

Number of animals (density)
Available food
Habitat use
Condition
Fertility
Mortality
Age, gender

 

 

 
 
 

Limitations

One cannot study "everything": data is costly
We need a goal
Formulate a hypothesis
Decide the nature of data needed
Choose methods
Get data
Analyze
Test your hypothesis

Sampling:
precision (random error) and bias (systematic error)

 
 

Heterogeneous population (all dogs): large variance
Focus your sample (only vizslas): small variance
However, narrow population, narrow validity
Solution: stratify!

3 different habitats + road
identify strata


 
 

systematic sampling: easier, however, if distribution is not random, sample might not be representative.

random sample: representative

 
 

Density estimation, some methods

Absolute density not needed, or not feasible: INDICES
All individuals seen, on whole area: Complete census (zoo park)
All individuals seen , on sample plots: Counts on Stripes, Quadrats, Line-transect
Not all individuals seen, animals can be captured: capture-recapture methods

 
 

Absolute density not needed, or not feasible: INDICES


Road counts, pellet counts, calls detected
Relation with true density in not known
Type of data:
Area A > area B, 2000 > 2001

see here for an example of road count with the participation of the public
go here to see how owls were surveyed by recording their sound on a standard transect line


       
  Good index: sensitive, no ceiling or floor effect  
 
 

All individuals seen , on sample plots

Counts on Stripes, Quadrats, Line-transect
(True census on plots with delectability = 1, density estimated for whole area)

 
 
Stripes
Position stripes (stratified random?)
Total area of stripes > 10 % of whole area
COUNT (!) all individuals on each stripe, estimate density for whole area
150 individuals on 10%
1500 individuals on area (SD!!!)
 
 

LINE TRANSECT
Position lines, (stratified random?)
Detectability on line = 1
Detectability diminishes by distance

estimate distance and angle. calculate perpendicular distance from line

sighting of a group is a single sighting! (calculate average groups size)

 
 

estimate distribution of distance data.

Advantages of line transect:
realistic requirement (all animals seen on line) vs all animals seen on stripe

WWW
software to evaluate distance data

 
 

Not all individuals seen, animals can be captured: capture-recapture methods

Animals captured and marked.
Animals released and recaptured. Ratio of marked individuals in recaptured sample is known.

100 recaptured with 10 individuals marked: estimation is 1000 individuals

Not so simple as this (closed population, probability of capturing marked or unmarked individuals is equal)

introduction to method + software www

 
 

Capturing animals

Birds

mist nets for smaller birds
traps for larger birds
Net Capture Guns

details on tools at Smithsonian

 

 

Mammals

live traps
drop net (see figure)
chemical immobilization (in food, shot syringe)

Photos on caribou immobilization and marking: www



 
 

Radiotelemetry

transmitters, fitted on collar www
weight of transmitter is critical

receiver with direction sensitive antenna


Physiological data: Activity, Temperature, Heart rate, ECG, EEG, muscle activity, Water, Light (rabbit), Pressure (air or water)

See a collection of sample studies at
E n v i r o n m e n t a l S t u d i e s www

 
New developments: GPS data transmitted!

GPS fitted on Sea Eagle (Haliaeetus albicilla) more on this)

  New developments: use of miniature cameras. see BBC news    
 

Marking

birds: rings, wingtag, dyes, radiotransmitter
more on Bird marking www

mammals: freeze band, dyes, collars, eartags

       
 

Condition

kidney fat index (kidney fat / kidney weight), correlates with body fat ratio.
floor effect: kidney fat depletes early (use bone marrow)

 
 

Age

Continuous variables (eye lense mass, body size of fishes, stature, antler, tooth ware www etc.) can be used to estimate age categories

Discrete variables: Plumage of birds ( yearling vs. old), tooth replacement (precision by month at young age species specific), ossification (young or old)

Figure illustrates ossification of radius and ulna of the European hare according to G. Kovacs. By cca 8 month of age the bump disappears.

       
  Growth lines (cementum annuli) worked out for many species. Calibration: animals injected with antibiotics, number of annuli since injection counted.
www: spectacular description of aging bear.
 
       
 
 

Diet analysis

Direct
Observation (semi-tame animals)
Choice tests (tame animals)

Post-ingeston samples
Feces (herbivores and carnivores)
Regurgitated pellets (carnivores, birds of prey)
Remains (bones) or marks (browsed twigs)
Stomach content

 
 

Herbivores
Feces: microhistology
Washing, Homogenizing, Clearing, Staining, Mounting.
Remains identified by species under microscope

Study these 3 plant species. Try to match them with the corresponding microhistology pics.
hint: go to source by clicking at the images

 
 

Fraxinus pennsylvanica (click)

       
       
  Leontodon hispidus (click)   Eleagnus angustifolia (click)
   

Pictures were kindly provided by
dr. Katalin Mátrai

 


   
 
 

Fertility

Analyis of follicles
Ovulation ? Corpus Luteum (yellow body)
In large and medium sized animals
Indicates ovulation rate.
May overestimate fertility

CL: corpora lutea

 
 
Uterine analyis
Number of fetuses: Reliable indicator

Placental scars: Detachment of placenta
For certain species: Rodents, bats, insectivores, lagomorpha, carnivores
European hare: all young within 9 months

 
 

Hormone profiles: LH surge prior to ovulation
For monitoring captive animals
Metabolites estimated from fecal samples

worked out for many species

 
 

Natality:

Number of young born

Direct observation: depends on species and habitat
Calves and fawns hide, difficult to find them

     
 

Mortality

difficult to locate dead animals
indirect estimation: number of animals missing
direct observations: for some species in open habitat
experiments: artificial nests

 

 
       
 

Camera trap: reintroduced pygmy pigs in the wild, see footage at BBC

Endangered cheetah filmed in wild, read news at BBC

 
 

Real birds eye view! Golden Eagle in flight - Animal Camera - BBC